BLASTP 2.2.28+


Query= gi|187775455|gb|EDU39257.1|

Length=377

Subject= V1.CD4-0-PN_GL0061845_381_1824696_9367642683

Length=381


Query_1    7    HELIRKLARDFAEQEIEPIADEVDKTAEFPKEIVKKMAQNGFFGIKMPKEYGGAGADNRA  66
Subject_1  9    Q...VQAY.EYM.S.WDQYFQ.C.EKH.Y.LRW..GLCDL..DQ.ML.EDR..L.LE-QP  68
                               \                                            
                               |                                            
                               P

Query_1    67   YVTIMEEISRASGVAGIYLSSPNSLLGTPFLLVGTDEQKEKYLKPMIRGEKTLAFALTEP  126
Subject_1  69   L..L..VLGQYG.PTYVLYQL.GF---ETIIRE..P..IDAVMAYLGT..QIWNS.C...  128
                     \                                                      
                     |                                                      
                   AVY

Query_1    127  GAGSDAGAVATTAREEGDYYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTFIVDS  186
Subject_1  129  .....VS.LT.NYKRRDGHIY...T.....SSKGVKWLV.MT.N--ADDPSIF.E.M..M  186

Query_1    187  KQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGELNKGFITAMKTLSVGRIGVAA  246
Subject_1  187  SKP.IEL.-.L..L.LRMDSCCEVYFND.ELDE...F.TEGN..NRGVSDFNFE.WL.G.  245

Query_1    247  QALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAYKMDC  306
Subject_1  246  CDY.N.IC.YED.LRH.N..EA.GKT.GR..LN.L.ITE.TIR...M.NML.E..WNA.N  307
                                                                           \
                                                                           |
                                                                          NN

Query_1    307  GEKADKEASMAKYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIYEGTSEV  366
Subject_1  308  ..FDAG..A.C..YC.NA.FKV.D.GM..M..ISVASEHR.N.FW..L..DR.SG..D.M  367

Query_1    367  QQMVIASNLLK  377
Subject_1  368  MILTT.K.A..  378


Lambda      K        H        a         alpha
   0.317    0.134    0.368    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 121797




Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40