BLASTP 2.2.28+


Query= gi|187775455|gb|EDU39257.1|

Length=377

Subject= V1.CD4-0-PN_GL0040628_390_1737503_8949997981

Length=390


Query_1    3    FTEQHELIRKLARDFAEQEIEPIADEVDKTAEFPKEIVKKMAQNGFFGIKMPKEYGGAGA  62
Subject_1  6    YSDEQK.L.ENI.KWGKEHL.K..-.AY.NRGIDSA.A.SWVDE..GKLGI.A....TPC  66
                                    \                                       
                                    |                                       
                                   PE

Query_1    63   DNRAYVTIMEEISRASGVAGIYLSSPNSLLGTPFLLVGTDEQKEKYLKPMIRGEKTLAFA  122
Subject_1  67   .HVTMAIAI..LCH---IG.NIPMA..L.IMFDVCEF..E..I-..AVDFYN.YPPYCL.  124
                                                                   \        
                                                                   |        
                                                                  YE

Query_1    123  LTEPGAGSDAGAVATTAREEGDYYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTF  182
Subject_1  125  IS..E...ANIYMT...KKL..GNVI..T..WV.F.EHANGF..VC.D.P.PEN.SMSMY  186
                                         \                      \           
                                         |                      |           
                                         E                      E

Query_1    183  IVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGELNKGFITAMKTLSVGRI  242
Subject_1  187  L..KDTP..VL-E.LN.I..QIN.FAMVHFN..I.PETAL...QG...LQL..NFEWE.C  245

Query_1    243  GVAAQALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAY  302
Subject_1  246  VLL.EL..E....M.D.CAWTNE.Q..GVG.KT..LV.EHIVE.QIA.TNTRNFL.RTCW  305

Query_1    303  KMDCGEKADKEASMAKYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIYEG  362
Subject_1  306  .L.N.IPVNND.A.L.RYG.PALTDVCSR...LM..L..TDATRVS..ML.C.GFQ.GG.  365

Query_1    363  TSEVQQMVIASNLLK  377
Subject_1  366  .V.IMVHIAGRGI..  380


Lambda      K        H        a         alpha
   0.317    0.134    0.368    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 124920




Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40