BLASTP 2.2.28+


Query= gi|187775455|gb|EDU39257.1|

Length=377

Subject= V1.CD4-0-PN_GL0081887_407_1575572_8158500832

Length=407


Query_1    5    EQHELIRKLARDFAEQEIEPIADEVDKTAEFPKEIVKKMAQNGFFGIKMPKEYGGAGADN  64
Subject_1  10   .MF.AYL.QI.ELV.GPF.EMQK.IEV.NK..D.FYELAKE.DLYRFYL.A....WNL.E  69

Query_1    65   RAYVTIMEEISRASGVAGIYLSSPNSLLGTPFLLVGTDEQKEKYLKPMIRGEKTLAFALT  124
Subject_1  70   LEILRVQ..F..GP.GMRMH.HHAADMNWRILEDY..P.I.GQLMDKFQDKTIYCN..I.  129
Subject_1  8                                        ...MF.A...                17

Query_1    125  EPGAGSDAGAVATTAREEGDYYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTFIV  184
Subject_1  130  .Q.T.A.LHTT.EWDE.K.KW-....E.WL.SHTDC..YTY.I.V.NPD.D.R-LSA.F.  191
                  \                                             \           
                  |                                             |           
                 TG                                            ED

Query_1    185  DSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGELNKGFITAMKTLSVGRIGV  244
Subject_1  192  PVDAP.YELVPMPHM..CR.AGHAGLKFT..ELGPEYL...VGQ.MEV.IHS...S.VHI  251

Query_1    245  AAQALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAYKM  304
Subject_1  252  .CSN..M..RMLEISLAR.AD.VT.GK..I.R...KM.I...QMMIH.LRTM..DF.RDF  311

Query_1    305  DCGEKADKEASMAKYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIYEGTS  364
Subject_1  312  .FNDYI.EK.AIC.L.SIDTVRLVSDEM.E.F..D..FE.SPT......C.AMWLE..AP  377
                 \                                       \                  
                 |                                       |                  
                FDP                                    PYG

Query_1    365  EVQQMVIA  372
Subject_1  378  T..RIT..  385


Lambda      K        H        a         alpha
   0.317    0.134    0.368    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 130096




Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40