BLASTP 2.2.28+


Query= gi|187775455|gb|EDU39257.1|

Length=377

Subject= V1.CD44-0_GL0006686_389_1747310_8997301176

Length=389


Query_1    3    FTEQHELIRKLARDFAEQEIEPIADEVDKTAEFPKEIVKKMAQNGFFGIKMPKEYGGAGA  62
Subject_1  11   LSKK.L.SQA.Y.S...N.VK.L.QDI.EKED..R.T.G...RC.MM..PV.E....Q.C  70

Query_1    63   DNRAYVTIMEEISRASGVAGIYLSSPNSLLGTPFLLVGTDEQKEKYLKPMIRGEKTLAFA  122
Subject_1  71   .TLS.IMCV..LAKVC.TTSVI..AHT..CID.I.TY..EA..H..IPDLAA.R.LG...  130

Query_1    123  LTEPGAGSDAGAVATTAREEGDYYILNGRKTFITGAPISDNIIVFAKTDMSKGTKGITTF  182
Subject_1  131  .......T.VQGQQ.K.VL.E.GWV...S.C...NGREA.VYV...V.GVT.KV.E.SA.  194
                                                                   \        
                                                                   |        
                                                                EKKG

Query_1    183  IVDSKQEGVSFGKPEDKMGMIGCPTSDIILENVKVHKSDILGELNKGFITAMKTLSVGRI  242
Subject_1  195  ...KGTP.F...TK.K...IR.SS.YEL.FSGCRIP.ENL..MTGR..GI..H..DG...  254

Query_1    243  GVAAQALGIAQAAVDEAVKYAKQRKQFNRPIAKFQAIQFKLANMETKLNAAKLLVYNAAY  302
Subject_1  255  .I......L.EG.FEAV...V.E....G.A.GQ..NT..R..D.AV.IE.......K..M  314

Query_1    303  KMDCGEKADKEASMAKYFAAESAIQIVNDALQIHGGYGYIKDYKIERLYRDVRVIAIYEG  362
Subject_1  315  AKQTQKSYSV..A...LY...T.MEVTER.V.L.......RE.DV..MM..AKITE....  374

Query_1    363  TSEVQQMVIASNLLK  377
Subject_1  375  .....R...SGSV..  389


Lambda      K        H        a         alpha
   0.317    0.134    0.368    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 124573




Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40