BLASTP 2.2.28+


Query= gi|187772789|gb|EDU36591.1|

Length=377

Subject= V1.CD4-0-PN_GL0040628_390_1737503_8949997981

Length=390


Query_1    3    FKKEHELLRKSVRDFVDRELKDIPEEVDTEGKLPKELLQKLAQYKFISPVIPKEYGGAGA  62
Subject_1  6    YSD.QK...ENI.KWGKEH.---...KIA.AYKNRGIDSAI.KSW.GKLG..A....TPC  66
                                                             \              
                                                             |              
                                                          VDEG

Query_1    63   DYVSYCIIMEEISKRCASTGTFITAGASLVALPLLNFGTDEQKEKYLKPLAKGEYIGSFG  122
Subject_1  67   .H.TMA.AI..L---.HIG.NIPM.PNL.IMFDVCE...E..IKYAVDFYYENG.PPCLA  124
                                                                         \  
                                                                         |  
                                                                         Y

Query_1    123  LTEPGAGSDAGAGQTTAVLEGDHYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAF  182
Subject_1  125  IS..E...ANIYMT...KKL..GNVI..T..WV.F.EHAN.IV.CKDEDPSPENKSM.MY  186
                                         \              \                   
                                         |              |                   
                                         E              G

Query_1    183  IVESKWDGFSTGAHENKMGIRGTETADLIFENVKVPKENLIGKEGKGFKIALNTLDVGRI  242
Subject_1  187  L.DKDTP.VVLEPL-..I.MQINPF.MVH.N..I..ETA.L.EQ....LQLMKNFEWE.C  245

Query_1    243  GVAAQALGIAQGALDEAVKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAE  302
Subject_1  246  VLL.EL..E..A.M.D.CAWTN..Q...VGIKT..LV.EH.VE.QIALTNT.NFL.RTCW  305

Query_1    303  KKDNGINPGVESAMAKYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITSIYEG  362
Subject_1  306  .L....PVNNDA..L.R.G.PALTD.CSR....M..L.YTDATRVS.LML.C.GFQ.GG.  365

Query_1    363  TSQVQQMVIAAKALK  377
Subject_1  366  .VEIMVHIAGRGI..  380


Lambda      K        H        a         alpha
   0.316    0.135    0.382    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 124920




Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40