BLASTP 2.2.28+


Query= gi|187772789|gb|EDU36591.1|

Length=377

Subject= V1.CD4-0-PT_GL0066496_214_4421621_21299798473

Length=214


Query_1    22   LKDIPEEVDTEGKLPKELLQKLAQYKFISPVIPKEYGGAGADYVSYCIIMEEISKRCAST  81
Subject_1  24   ..PHAARW.K.HEF.IPTIKQA.GLG.CGLYT.EQF..L.LPRLDASL.F.RLAMG.T..  83

Query_1    82   GTFITAGASLVALPLLNFGTDEQKEKYLKPLAKGEYIGSFGLTEPGAGSDAGAGQTTAVL  141
Subject_1  84   TAYL.I-HNM.SWM.GSWLPT.VAKEWVPK..S..LL..YC..........A.LKPR..R  142

Query_1    142  EGDHYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAFIVESKWDGFSTGAHENKMG  201
Subject_1  143  ...S.LIE.T.V..SG.GSS.VLV.M.R.-G.E.AK.....M.PANAP.V.Y.KA.E...  201

Query_1    202  IRGTETADLIF  212
Subject_1  202  WNSQP.REVV.  212


Lambda      K        H        a         alpha
   0.316    0.135    0.382    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 65988




Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40