BLASTP 2.2.28+


Query= gi|187772789|gb|EDU36591.1|

Length=377

Subject= V1.CD44-0_GL0006686_389_1747310_8997301176

Length=389


Query_1    3    FKKEHELLRKSVRDFVDRELKDIPEEVDTEGKLPKELLQKLAQYKFISPVIPKEYGGAGA  62
Subject_1  11   LS.K.L.SQALY.S.AEN.V.PLAQDI.EKEDF.R.TVG.M.RCGMMGIPV.E....Q.C  70

Query_1    63   DYVSYCIIMEEISKRCASTGTFITAGASLVALPLLNFGTDEQKEKYLKPLAKGEYIGSFG  122
Subject_1  71   .TL..IMCV..LA.V.GT.SVILS.HT..CID.I.TY..EA..H..IPD..A.RKL.A.A  130

Query_1    123  LTEPGAGSDAGAGQTTAVLEGDHYILNGRKTFITNAPICDFAIVTAMTEKGKGSRGISAF  182
Subject_1  131  .......T.VQGQ..K....E.GWV...S.C....GREA.VYV.F.V.K...KVKE....  194
                                                                \           
                                                                |           
                                                             GVTE

Query_1    183  IVESKWDGFSTGAHENKMGIRGTETADLIFENVKVPKENLIGKEGKGFKIALNTLDVGRI  242
Subject_1  195  ..DKGTP...F.TK.K......SS.YE...SGCRI.....L.MT.R..G..MH...G...  254

Query_1    243  GVAAQALGIAQGALDEAVKYVKERVQFGRPLAKFQNTQFTIADMETKVQAARWLVYDAAE  302
Subject_1  255  .I......L.E..FEAV.......K....AIGQ......RL...AV.IE..KL...K..M  314

Query_1    303  KKDNGINPGVESAMAKYYAAEIANEVAYKALQLHGGYGFMKDYPIERMYRDARITSIYEG  362
Subject_1  315  A.QTQKSYS..A....L....T.M..TER.V.......YIRE.DV...M...K..E....  374

Query_1    363  TSQVQQMVIAAKALK  377
Subject_1  375  ..E..R...SGSV..  389


Lambda      K        H        a         alpha
   0.316    0.135    0.382    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 124573




Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40